Past, present, future SEG

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Today was the first day of the SEG Annual Meeting in Houston. 

Last night we wandered around the icebreaker, still buzzing from the hackathon. The contrast was crushing. The exhibition is gigantic — it's an almost overwhelming amount of marketing. My thoughts on what the exhibition hall is, and what it represents, are not fully formed and might be a bit... ranty, so I will save them for a more considered post. 

As usual, SEG kicked off with a general session — much better attended this year, but also much less ambitious. At least 300 members came to hear outgoing president David Monk's perspective on SEG's future. His address mostly looked backwards, however, at the trends over the last few years. I guess the idea is to extrapolate from there... But maybe we can do even better than recent years? We mustn't forget to do completely new and unexpected things too. 

At the end of his slot, Monk showed some animated renderings of SEG's new building in Tulsa. The movie was accompanied by an almost comically strident anthem — evidently it is a big deal. As well as having a smart new office, the real estate will turn in some smart new revenue from other tenants. Ground was broken on Friday, and the opening is expected to be in December 2014. As you see, the architects understood industrial geophysics quite well, opting for a large black box. 

At the end of the day, Canada strode home to yet another SEG Challenge Bowl victory as the University of Manitoba fought off the Autonomous University of Mexico and Colorado School of Mines to prove that, while Texas might be the home of the industry, Canada is the home of exploration geophysics. 

Where's all the geophysics? Evan is compiling some technical highlights from the day as I type. Stay tuned for that. 

If you're at the conference, tell us what you've enjoyed most about the first 24 hours.

Garage geoscience

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The Geophysics Hackathon 2013 is over. It was awesome. You should have been there.

The backers

I didn't make a big effort to find sponsors, because I didn't need to — just like the participants, they self-select. dGB Earth Sciences, Enthought, and OpenGeoSolutions are the leaders in the business of open geophysical software. Their support and encouragement means a lot to me personally, and is having a huge impact on our community. Please support them when you have the chance. We need companies like these.

The hackers

There was not too much of a plan. We were keen to allow organic collaboration to happen. So the hackers arrived on Saturday morning, and spent an hour or two matching projects to interests and skills. They settled down to work at about 10:30, and the creative buzz in the room was palpable.

The projects that emerged were:

  • Data viewers for amorphous well data masses, addressing uncertainty due to data disorganization
  • A seismic signal processing sandbox in the web browser, addressing resolution uncertainty
  • Mobile and desktop apps for on-the-fly time–depth transformation, with error bars

On Sunday we ended up in START Houston's garage space, with the doors open to the beautiful fall morning. It had the ambience of a picnic. A sunny Sunday morning with cinnamon coffee, breakfast tacos, Python, and geophysics — what more could you ask for?

The geeks among you might be interested to know what sort of hardware the hacking geophysicists were developing their ideas on. Turns out it was perfectly evenly distributed: 4 each of Mac, Windows, and Linux. Of the Linux distros, there was 1 each of Centos, Ubuntu, crunchbang, and OpenSuse.

At the request of Chris Chalcraft, I also did an impromptu poll of code editor software. This was similarly diverse:

The other backers

Chris Krohn has been a true champion of the event. On Saturday, she brought new SEG president-elect Chris Liner to visit the event — his natural curiosity and enthusiasm are infectious, and lifted everyone present. I hope he's able to realize some of his vision during his presidency. (You do read his blog, right?)

Today she returned with Dennis Cooke and Peter Annan. They all graciously acted as judges. The other judges were Paul de Groot and Eric Jones, two of our generous sponsors, and Maitri Erwin, one of Agile's closest friends. Though they couldn't stick around, we also had visits from Zane Jobe and Joe Dellinger — much appreciated votes of support.

We'll be blogging about the SEG Annual Meeting all week... when the dust has settled a bit, we'll tell you more about the projects the hackers built. It's amazing what you can do in 2 days.

Places for ideas in Houston

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Evan has told before of how productive he is at the HUB Halifax. And ever since I've been involved in The HUB South Shore, a co-working space in my small town, I've been keenly interested in communal and collaborative workspaces. I think they're a powerful model for independent scientists and entrepreneurs, perhaps even inside large companies too. 

Because of this, and because most hotels are such boring venues (there are always exceptions), we decided to host the hackathon this weekend at a co-working space, START Houston (right). A converted urban loft residence (well, a loft on the ground floor), it's got downtown character with an artistic edge. Evan and I gatecrashed a startup pitch coaching session while we were there — we heard 3-minute pitches from 4 Houston startups, including eOilBoom, an interesting crowdfunding platform for oil and gas concerns, and Philantro, a curated social layer for non-profits and philanthropists.

We need this level of ideation, business-model testing, and experimental entrepreneurship in subsurface science. How do we make this happen?

Co-working? Co-reseach!

Two weeks ago, I tweeted something about the hackathon, and Jacob at Brightwork Co-Research tweeted back at me:

Just another one of the wonderful serendipities of social media. That one connection is worth a lot to me, and is characteristic of the generous community of scientists on Twitter.

While in town, we thought we'd drop in and see what Brightwork is about... and I've rarely been more excited. Jacob Shiach (left) showed us the embryonic space neighbouring Rice University, complete with a rapid prototyping space (think of hardware hacking soldering, 3D printers, and so on), and a wet lab for full-on biotechnical research. In under a year, Jacob plans to fill the space with researchers in bio, physics, math, technology, and any other scientific discipline that needs a lab outside of academia or industry. What can independent researchers do when they have all the tools of big research? What would you do with your own lab?

These places exist

To complete our tour, we headed over to Platform — a more conventional co-working space around the corner from Brightwork. The familiar buzz and productive vibe of co-working hits you immediately: here a livestream of TEDxHouston City2.0, there a new startup hashing out customer segments for their product. Imagine an office full of smart, energetic, friendly people who don't actually have to work together, no meetings, and no sign above the sink saying "Your mother doesn't work here!". Yeah, those places exist.

Looking forward to SEG 2013

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The SEG Annual Meeting is coming! The program starts tomorrow with the DISC, and continues over the weekend with various other courses. It's not part of the conference, but we're looking forward to the Geophysics Hackathon, obviously. Curious? You're welcome to drop in.

The meeting boasts 124 technical sessions totalling over 1000 PowerPoint presentations. If you haven't looked at the list of expanded abstracts yet, I can't blame you, it's a massive amount of content and the website experience is, er, not optimal — and there's no helpful mobile app this year. [Update: The app came out today! Go get it, it's essential. Thank you Whitney at SEG for letting us know.] I've tried to pick out a few sessions that seem really exciting below.

Worst. App. Ever.Each day at 10:30 am, I will be doing a guest presentation at the Enthought booth, showing some novel geophysics tools that I've been making. They are powered by Python and Enthought's Canopy environment. Come by and I will show you that you can too! However, I need somebody to please go to this exhibition booth 'browser' and show me where the Enthought booth is. Worst. App. Ever.

And each day at 11 am, there's a 2-hour mini-wikithon. Stop by the Press Room for a quick tour of SEG Wiki, and find out how you can help make it better.

Monday

With no technical presentations on Monday morning, it is safe to assume that most delegates will be wandering around the exhibition hall. A few may trickle over to the unenticing Opening Session which Matt and I found was horribly attended last year and the year before. Matt at least will be there, mostly out of morbid curiosity.

Continuing the Hackathon's theme on error and uncertainty, I will be diving into the session on Monday afternoon called

From 3-6 pm be sure to check out the always popular SEG Student Challenge Bowl. The global finals, are hosted by the crowd-pleasing past SEG president (and fellow Canadian) Peter Duncan. Top pairings from Universities across the world duking it out in a button-pushing quiz show. Come out, cheer on the students and test your own geophysics trivia from the audience.

Tuesday

The sessions that look appealing to me on Tuesday are

Wednesday

Agile's good friend Maitri Erwin is the instigator behind the Women's Networking Breakfast. All are welcome; consider yourself lucky to connect with Maitri. As for talks, I will try make an appearance at

The first one I know quite a bit about, but can always use a refresher, and the second one I know very little about, but it's been a hot topic for 3 or 4 years now. If we aren't worn out at the end of the day, we might find some tickets to the Bayou Bash.

Thursday & Friday

There are over a dozen workshops on both Thursday and Friday. As far as I can tell, they are basically more talks, each around a central theme. Don't ask me how this is in any way distinguishable from the technical program, and there is still a full suite of technical sessions conflicting on Thursday morning. It's a shame because I'm curious to attend the session Fractures, shale and well-log characterization but I don't want to miss Workshop 2, Grand challenges, which takes place all day on Thursday. Then on Friday there's Characterizing fractures (Workshop 15).

There are many other events going on, so if you see something good, make sure you tweet the rest of us about it: @EvanBianco, @kwinkunks, @maitri, @toastar, and lots of others — follow hashtag #SEG13. (Not #SEG2013, that's all marketing wonks).

If you'll be at the Annual Meeting, do look out for us, we'd love to meet you. If you won't be there, tell us what you'd like to hear about. News from the exhibition? Our favourite talks? Detailed minutes from the committee meetings? Let us know in the comments.

Ten ways to make a difference

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SEG WikiAfter reading my remarks yesterday about geoscience wikis, perhaps you're itching to share some of what you know. Below are ten quick ways to get started. And if you're going to SEG next week, you're in luck: you'll find a quick way to get started. 

Ten things you can do

First, if you really just want to dive in, here are ten easy things you can do in almost any wiki. Let's use SEG Wiki as an example — but this applies equally well to SubSurfWiki, PetroWiki, or Wikipedia.

  1. Read it — find a page or category that interests you, and start exploring the content
  2. Edit it — nothing tricky, but if you find a typo or other small error, hit Edit and fix it (you can do this without logging in on Wikipedia, but most other wikis require you to make an account first. This isn't usually a deliberate effort to put you off — allowing anonymous editing results in an amazing amount robot spam. Yes, robot spam.)
  3. Share it — like most of the web, wikis need to be shared to survive. When you find something useful, share it.
  4. Add a profile — if you're an SEG member, you already have an account on SEG Wiki. Why not add some info about yourself? Go log in to SEG.org then click this link. Here's mine. 
  5. Add a sandbox — Edit your user page, add this: [[/Sandbox/]], then save your page. You'll see a red link. Click on it. Try some editing — you can do anything you like here. Again, here's mine — click Edit and copy my code. 
  6. Fix equations — most of the equations in the SEG Encyclopedic Dictionary are poorly formatted. If you know LaTeX, you can help fix them. Here's one that's been fixed. Here's a bad one (if it looks OK, someone beat you to it :)
  7. Add references — Just like technical papers, wikis need citations and references if they are to be useful and trusted. Most articles in SEG Wiki have citations, but the references are on another page. Here's one I've fixed. 
  8. Add a figure — Again, the figures are mostly divorced from their articles. The Q article shows one way to integrate them. Some articles have lots of figures. 
  9. Improve a definition — Many of the Dictionary definitions are out of date or unhelpfully terse. Long articles probably belong in the 'main' namespace (that is, not the Dictionary part) — so for example I split Spectral decomposition into a main article, apart from the short dictionary definition.
  10. Add an article — This may seem like a big step, but don't be shy. Be bold! We can worry later if the new article needs to be split or combined or renamed or reformatted. The point is to start.

Wiki markup takes a little getting used to, but you can get a very long way with a little know-how. This wiki markup cheatsheet will give you a head start.

One place you can start

SEG Annual MeetingAt the SEG Annual Meeting next week, I'll be hanging about the Press Room from 11 am till 1 pm every day, with John Stockwell, Karl Schleicher and some other wiki enthusiasts. We'd be happy to answer any questions or help you get started.

Bring your laptop! Spread the word! Bring a friend! See you there!

Wiki world of geoscience

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This weekend, I noticed that there was no Wikipedia article about Harry Wheeler, one of the founders of theoretical stratigraphy. So I started one. This brings the number of biographies I've started to 3:

  • Karl Zoeppritz — described waves almost perfectly, but died at the age of 26
  • Johannes Walther — started as a biologist, but later preferred rocks
  • Harry Wheeler — if anyone has a Wheeler diagram to share, please add it!

Many biographies of notable geoscientists are still missing (there are hundreds, but here are three): 

  • Larry Sloss — another pioneer of modern stratigraphy
  • Oz Yilmaz — prolific seismic theoretician and practioner
  • Brian Russell — entrepreneur and champion of seismic analysis

It's funny, Wikipedia always seems so good — it has deep and wide content on everything imaginable. I think I must visit it 20 or 30 times a day. But when you look closely, especially at a subject you know a bit about, there are lots of gaps (I wonder if this is one of the reasons people sometimes deride it?). There is a notability requirement for biographies, but for some reason this doesn't seem to apply to athletes or celebrities. 

I was surprised the Wheeler page didn't exist, but once you start reading, there are lots of surprises:

I run a geoscience wiki, but this is intended for highly esoteric topics that probably don't really belong in Wikipedia, e.g. setting parameters for seismic autopickers, or critical reviews of subsurface software (both on my wish list). I am currently working on a wiki for AAPG — is that the place for 'deep' petroleum geoscience? I also spend time on SEG Wiki... With all these wikis, I worry that we risk spreading ourselves too thinly? What do you think?

In the meantime, can you give 10 minutes to improve a geoscience article in Wikipedia? Or perhaps you have a classful of students to unleash on an assignment?

Tomorrow, I'll tell you about an easy way to help improve some geophysics content.

Seismic quality traffic light

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We like to think that our data are perfect and limitless, because experiments are expensive and scarce. Only then can our interpretations hope to stand up to even our own scrutiny. It would be great if seismic data was a direct representation of geology, but it never is. Poor data doesn't necessarily mean poor acquisition or processing. Sometimes geology is complex!

In his book First Steps in Seismic Interpretation, Don Herron describes a QC technique of picking a pseudo horizon at three different elevations to correspond to poor, fair, and good data regions. I suppose that will do in a pinch, but I reckon it would take a long time, and it is rather subjective. Surely we can do better?

Computing seismic quality

Conceptually speaking, the ease of interpretation depends on things we can measure (and display), like coherency, bandwidth, amplitude strength, signal-to-noise, and so on. There is no magic combination of filters that will work for all data, but I am convinced that for every seismic dataset there is a weighted function of attributes that can be concocted to serve as a visual indicator of the data complexity:

So one of the first things we do with new data at Agile is a semi-quantitative assessment of the likely ease and reliability of interpretation.

This traffic light display of seismic data quality, corendered here with amplitude, is not only a precursor to interpretation. It should accompany the interpretation, just like an experiment reporting its data with errors. The idea is to show, honestly and objectively, where we can trust eventual interpretations, and where they not well constrained. A common practice is to cherry pick specific segments or orientations that support our arguments, and quietly suppress those that don't. The traffic light display helps us be more honest about what we know and what we don't — where the evidence for our model is clear, and where we are relying more heavily on skill and experience to navigate a model through an area where the data is unclear or unconvincing.

Capturing uncertainty and communicating it in our data displays is not only a scientific endeavour, it is an ethical one. Does it change the way we look at geology if we display our confidence level alongside? 

Reference

Herron, D (2012). First Steps in Seismic Interpretation. Geophysical Monograph Series 16. Society of Exploration Geophysicists, Tulsa, OK.

The seismic profile shown in the figure is from the Kennetcook Basin, Nova Scotia. This work was part of a Geological Survey of Canada study, available in this Open File report.

What is Creative Commons?

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Not a comprehensive answer either, but much more brilliantI just found myself typing a long email in reply to the question, "What is a Creative Commons license and how do I use it?" Instead, I thought I'd post it here. Note: I am not a lawyer, and this is not a comprehensive answer.

Creative Commons depends on copyright

There is no relinquishment of copyright. This is important. In the case of 52 Things, Agile Geoscience is the copyright holder. In the case of an article, it's the authors themselves, unless the publisher gets them to sign a form relinquishing it. Copyright is an automatic, moral right (under the Berne Convention), and boils down to the right to be identified as the authors of the work ('attribution').

Most copyright holders grant licenses to re-use their work. For instance, you can pay hundreds of dollars to reproduce a couple of pages from an SPE manual for a classroom of students (if you are insane). You can reprint material from a book or journal article — again, usually for a fee. These licenses are usually non-exclusive, non-transferable, and use-specific. And the licensee must (a) ask and (b) pay the licensor (that is, the copyright holder). This is 'the traditional model'.

Obscurity is a greater threat than piracy

Some copyright holders are even more awesome. They recognize that (a) it's a hassle to always have to ask, and (b) they'd rather have the work spread than charge for it and stop it spreading. They wish to publish 'open' content. It's exactly like open source software. Creative Commons is one, very widespread, license you can apply to your work that means (a) they don't have to ask to re-use it, and (b) they don't have to pay. You can impose various restrictions if you must.

Creative Commons licenses are everywhere. You can apply Creative Commons licenses at will, to anything you like. For example, you can CC-license your YouTube videos or Flickr photos. We CC-license our blog posts. Almost everything in Wikipedia is CC-licensed. You could CC-license a single article in a magazine (in fact, I somewhat sneakily did this last February). You could even CC-license a scientific journal (imagine!). Just look at all the open content in the world!

Creative Commons licenses are easy to use. Using the license is very easy: you just tell people. There is no cost or process. Look at the footer of this very page, for example. In print, you might just add the line This article is licensed under a Creative Commons Attribution license. You may re-use this work without permission. See http://creativecommons.org/licenses/by/3.0/ for details. (If you choose another license, you'd use different wording.)

Creative_Commons.jpg

I recommend CC-BY licenses. There are lots of open licenses, but CC-BY strikes a good balance between being well-documented and trusted, and being truly open (though it is not recognized as such, on a technicality, by copyfree.org). The main point is that they are very open, allowing anyone to use the work in any way, provided they attribute it to the author and copyright holder — it's just like scientific citation, in a way.

Do you openly license your work? Or do you wish more people did? Do you notice open licenses?

Creative Commons graphic by Flickr user Michael Porter. The cartoon is from Nerdson, and licensed CC-BY. 'Obscurity is a greater threat than piracy' is paraphrased from a quote by Tim O'Reilly, publishing 2.0 legend. 

Back to work

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This post first appeared as a chapter in 52 Things You Should Know About Geophysics (Agile Libre, 2012 — also at Amazon). To follow up on Back to school on Tuesday, I thought I'd share it here on the blog. It's aimed at young professionals, but to be honest, I could do with re-reading it myself now and again...

Five things I wish I'd known

For years I struggled under some misconceptions about scientific careers and professionalism. Maybe I’m not particularly enlightened, and haven't really woken up to them yet, and it's all obvious to everyone else, but just in case I am, I have, and it's not, here are five things I wish I'd known at the start of my career.

Always go the extra inch. You don't need to go the extra mile — there often isn't time and there's a risk that no one will notice anyway. An inch is almost always enough. When you do something, like work for someone or give a presentation, people only really remember two things: the best thing you did, and the last thing you did. So make sure those are awesome. It helps to do something unexpected, or something no one has seen before. It is not as hard as you'd think — read a little around the edges of your subject and you'll find something. Which brings me to...

Read, listen, and learn. Subscribe to some periodicals, preferably ones you will actually enjoy reading. You can see my favourites in J is for Journal. Go to talks and conferences, as often as you reasonably can. But, and this is critical, don't just go — take part. Write notes, ask questions, talk to presenters, discuss with others afterwards. And learn: do take courses, but choose them wisely. In my experience, most courses are not memorable or especially effective. So ask for recommendations from your colleagues, and make sure there is plenty of hands-on interaction in the course, preferably on computers or in the field. Good: Dan Hampson talking you through AVO analysis on real data. Bad: sitting in a classroom watching someone derive equations.

Write, talk, and teach. The complement to read, listen, and learn. It's never too early in your career to start — don't fall into the trap of thinking no one will be interested in what you do, or that you have nothing to share. Even new graduates have something in their experience that nobody else has. Technical conference organizers are desperate for stories from the trenches, to dilute the blue-sky research and pseudo-marketing that most conferences are saturated with. Volunteer to help with courses. Organize workshops and lunch-and-learns. Write articles for Recorder, First Break, or The Leading Edge. Be part of your science! You'll grow from the experience, and it will help you to...

Network, inside and outside your organization. Networking is almost a dirty word to some people, but it doesn’t mean taking people to hockey games or connecting with them on LinkedIn. By far the best way to network is to help people. Help people often, for free, and for fun, and it will make you memorable and get you connected. And it's easy: at least 50 percent of the time, the person just needs a sounding board and they quickly solve their own problem. The rest of the time, chances are good that you can help, or know someone who can. Thanks to the Matthew Effect, whereby the rich get richer, your network can grow exponentially this way. And one thing is certain in this business: one day you will need your network.

Learn to program. You don't need to turn yourself into a programmer, but my greatest regret of my first five years out of university is that I didn't learn to read, re-use, and write code. Read Learn to program to find out why, and how.

Do you have any advice for new geoscientists starting out in their careers? What do you wish you'd known on Day 1?

Back to school

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My children go back to school this week. One daughter is going into Grade 4, another is starting kindergarten, and my son is starting pre-school at the local Steiner school. Exciting times.

I go all misty-eyed at this time of year. I absolutely loved school. Mostly the learning part. I realize now there are lots of things I was never taught (anything to do with computers, anything to do with innovation or entrepreneurship, anything to do with blogging), but what we did cover, I loved. I'm not even sure it's learning I like so much — my retention of facts and even concepts is actually quite bad — it's the process of studying.

Lifelong learning

Naturally, the idea of studying now, as a grown-up and professional, appeals to me. But I stopped tracking courses I've taken years ago, and actually now have stopped doing them, because most of them are not very good. I've found many successful (that is, long running) industry courses to be disappointingly bad — long-running course often seems to mean getting a tired instructor and dated materials for your $500 per day. (Sure, you said the course was good when you sis the assessment, but what did you think a week later? A month, a year later? If you even remember it.) I imagine it's all part of the 'grumpy old man' phase I seem to have reached when I hit 40.

But I am grumpy no longer! Because awesome courses are back...

So many courses

Last year Evan and I took three high quality, and completely free, massive online open courses, or MOOCs:

There aren't a lot of courses out there for earth scientists yet. If you're looking for something specific, RedHoop is a good way to scan everything at once.

The future

These are the gold rush days, the exciting claim-staking pioneer days, of massive online open courses. Some trends:

There are new and profound opportunities here for everyone from high school students to postgraduates, and from young professionals to new retirees. Whether you're into teaching, or learning, or both, I recommend trying a MOOC or two, and asking yourself what the future of education and training looks like in your world.

The questions is, what will you try first? Is there a dream course you're looking for?